Transcriptomic data of Arabidopsis hypocotyl overexpressing a heterologous CsEXPA1 gene

Research output: Contribution to journalArticle

1 Citation (Scopus)

Abstract

Expansin increases cell wall extensibility to allow cell wall loosening and cell expansion even in the absence of hydrolytic activity. Previous studies showed that excessive overexpression of expansin gene resulted in defective growth (Goh et al., 2014; Rochange et al., 2001) [1,2] and altered cell wall chemical composition (Zenoni et al., 2011) [3]. However, the molecular mechanism on how the overexpression of non-enzymatic cell wall protein expansin can result in widespread effects on plant cell wall and organ growth remains unclear. We acquired transcriptomic data on previously reported transgenic Arabidopsis line (Goh et al., 2014) [1] to investigate the effects of overexpressing a heterologus cucumber expansin gene (CsEXPA1) on the global gene expression pattern during early and late phases of etiolated hypocotyl growth.

Original languageEnglish
Pages (from-to)320-323
Number of pages4
JournalData in Brief
Volume15
DOIs
Publication statusPublished - 1 Dec 2017

Fingerprint

expansins
transcriptomics
hypocotyls
cell walls
Arabidopsis
genes
extensibility
cucumbers
chemical composition
genetically modified organisms
gene expression
proteins
cells

Keywords

  • 3′ mRNA sequencing
  • Cell wall
  • Expansin
  • Hypocotyl
  • QuantSeq

ASJC Scopus subject areas

  • General

Cite this

Transcriptomic data of Arabidopsis hypocotyl overexpressing a heterologous CsEXPA1 gene. / Ilias, Iqmal Asyraf; Othman, Babul Airianah; Baharum, Syarul Nataqain; Goh, Hoe Han.

In: Data in Brief, Vol. 15, 01.12.2017, p. 320-323.

Research output: Contribution to journalArticle

@article{df754a7efffd4931abae728a2aecab9e,
title = "Transcriptomic data of Arabidopsis hypocotyl overexpressing a heterologous CsEXPA1 gene",
abstract = "Expansin increases cell wall extensibility to allow cell wall loosening and cell expansion even in the absence of hydrolytic activity. Previous studies showed that excessive overexpression of expansin gene resulted in defective growth (Goh et al., 2014; Rochange et al., 2001) [1,2] and altered cell wall chemical composition (Zenoni et al., 2011) [3]. However, the molecular mechanism on how the overexpression of non-enzymatic cell wall protein expansin can result in widespread effects on plant cell wall and organ growth remains unclear. We acquired transcriptomic data on previously reported transgenic Arabidopsis line (Goh et al., 2014) [1] to investigate the effects of overexpressing a heterologus cucumber expansin gene (CsEXPA1) on the global gene expression pattern during early and late phases of etiolated hypocotyl growth.",
keywords = "3′ mRNA sequencing, Cell wall, Expansin, Hypocotyl, QuantSeq",
author = "Ilias, {Iqmal Asyraf} and Othman, {Babul Airianah} and Baharum, {Syarul Nataqain} and Goh, {Hoe Han}",
year = "2017",
month = "12",
day = "1",
doi = "10.1016/j.dib.2017.09.050",
language = "English",
volume = "15",
pages = "320--323",
journal = "Data in Brief",
issn = "2352-3409",
publisher = "Elsevier BV",

}

TY - JOUR

T1 - Transcriptomic data of Arabidopsis hypocotyl overexpressing a heterologous CsEXPA1 gene

AU - Ilias, Iqmal Asyraf

AU - Othman, Babul Airianah

AU - Baharum, Syarul Nataqain

AU - Goh, Hoe Han

PY - 2017/12/1

Y1 - 2017/12/1

N2 - Expansin increases cell wall extensibility to allow cell wall loosening and cell expansion even in the absence of hydrolytic activity. Previous studies showed that excessive overexpression of expansin gene resulted in defective growth (Goh et al., 2014; Rochange et al., 2001) [1,2] and altered cell wall chemical composition (Zenoni et al., 2011) [3]. However, the molecular mechanism on how the overexpression of non-enzymatic cell wall protein expansin can result in widespread effects on plant cell wall and organ growth remains unclear. We acquired transcriptomic data on previously reported transgenic Arabidopsis line (Goh et al., 2014) [1] to investigate the effects of overexpressing a heterologus cucumber expansin gene (CsEXPA1) on the global gene expression pattern during early and late phases of etiolated hypocotyl growth.

AB - Expansin increases cell wall extensibility to allow cell wall loosening and cell expansion even in the absence of hydrolytic activity. Previous studies showed that excessive overexpression of expansin gene resulted in defective growth (Goh et al., 2014; Rochange et al., 2001) [1,2] and altered cell wall chemical composition (Zenoni et al., 2011) [3]. However, the molecular mechanism on how the overexpression of non-enzymatic cell wall protein expansin can result in widespread effects on plant cell wall and organ growth remains unclear. We acquired transcriptomic data on previously reported transgenic Arabidopsis line (Goh et al., 2014) [1] to investigate the effects of overexpressing a heterologus cucumber expansin gene (CsEXPA1) on the global gene expression pattern during early and late phases of etiolated hypocotyl growth.

KW - 3′ mRNA sequencing

KW - Cell wall

KW - Expansin

KW - Hypocotyl

KW - QuantSeq

UR - http://www.scopus.com/inward/record.url?scp=85030754810&partnerID=8YFLogxK

UR - http://www.scopus.com/inward/citedby.url?scp=85030754810&partnerID=8YFLogxK

U2 - 10.1016/j.dib.2017.09.050

DO - 10.1016/j.dib.2017.09.050

M3 - Article

AN - SCOPUS:85030754810

VL - 15

SP - 320

EP - 323

JO - Data in Brief

JF - Data in Brief

SN - 2352-3409

ER -