Small RNA-seq analysis in response to methyl jasmonate and abscisic acid treatment in Persicaria minor

Nazaruddin Nazaruddin, Abdul Fatah A. Samad, Muhammad Sajad, Jaeyres Jani, Zamri Zainal, Ismanizan Ismail

Research output: Contribution to journalArticle

3 Citations (Scopus)

Abstract

Persicaria minor (Kesum) is an important medicinal plant with high level of secondary metabolite contents, especially, terpenoids and flavonoids. Previous studies have revealed that application of exogenous phytohormone could increase secondary metabolite contents of the plant. MicroRNAs (miRNAs) are small RNAs that play important regulatory roles in various biological processes. In order to explore the possible role of miRNA in the regulation of these phytohormones signaling pathway and uncovering their potential correlation, we, for the first time, have generated the smallRNA library of Kesum plant. The library was developed in response to methyl jasmonate (MJ) and abscisic acid (ABA) treatment by using next-generation sequencing technology. Raw reads have been deposited to SRA database with the accession numbers, SRX2655642 and SRX2655643 (MJ-treated), SRXSRX2655644 and SRX2655645 (ABA-treated) and SRX2655646and SRX2655647 (Control).

Original languageEnglish
Pages (from-to)157-158
Number of pages2
JournalGenomics Data
Volume12
DOIs
Publication statusPublished - 1 Jun 2017

Fingerprint

Abscisic Acid
Plant Growth Regulators
Metabolites
MicroRNAs
Libraries
RNA
Biological Phenomena
Terpenes
Medicinal Plants
Flavonoids
Databases
Technology
methyl jasmonate

Keywords

  • Methyl jasmonate and abscisic acid
  • miRNA
  • Persicaria minor
  • Small RNA sequencing

ASJC Scopus subject areas

  • Biotechnology
  • Biochemistry
  • Molecular Medicine
  • Genetics

Cite this

Small RNA-seq analysis in response to methyl jasmonate and abscisic acid treatment in Persicaria minor. / Nazaruddin, Nazaruddin; Samad, Abdul Fatah A.; Sajad, Muhammad; Jani, Jaeyres; Zainal, Zamri; Ismail, Ismanizan.

In: Genomics Data, Vol. 12, 01.06.2017, p. 157-158.

Research output: Contribution to journalArticle

Nazaruddin, Nazaruddin ; Samad, Abdul Fatah A. ; Sajad, Muhammad ; Jani, Jaeyres ; Zainal, Zamri ; Ismail, Ismanizan. / Small RNA-seq analysis in response to methyl jasmonate and abscisic acid treatment in Persicaria minor. In: Genomics Data. 2017 ; Vol. 12. pp. 157-158.
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