Fingerprinting of hydroxyl radical-attacked polysaccharides by N-isopropyl-2-aminoacridone labelling

Robert A M Vreeburg, Babul Airianah Othman, Stephen C. Fry

Research output: Contribution to journalArticle

9 Citations (Scopus)

Abstract

Hydroxyl radicals (•OH) cause non-enzymic scission of polysaccharides in diverse biological systems. Such reactions can be detrimental (e.g. causing rheumatic and arthritic diseases in mammals) or beneficial (e.g. promoting the softening of ripening fruit, and biomass saccharification). Here we present a method for documenting •OH action, based on fluorescent labelling of the oxo groups that are introduced as glycosulose residues when •OH attacks polysaccharides. The method was tested on several polysaccharides, especially pectin, after treatment with Fenton reagents. 2-Aminoacridone plus cyanoborohydride reductively aminated the oxo groups in treated polysaccharides; the product was then reacted with acetone plus cyanoborohydride, forming a stable tertiary amine with the carbohydrate linked to N-isopropyl-2-aminoacridone (pAMAC). Digestion of labelled pectin with 'Driselase' yielded several fluorescent products which on electrophoresis and HPLC provided a useful 'fingerprint' indicating •OH attack. The most diagnostic product was a disaccharide conjugate of the type pAMAC·UA-GalA (UA = unspecified uronic acid), whose UA-GalA bond was Driselaseresistant (product 2A). 2Awas clearly distinguishable fromGalAGalA-pAMAC (disaccharide labelled at its reducing end), which was digestible to GalA-pAMAC. The methodology is applicable, with appropriate enzymes in place of Driselase, for detecting natural and artificial •OH attack in diverse plant, animal and microbial polysaccharides.

Original languageEnglish
Pages (from-to)225-237
Number of pages13
JournalBiochemical Journal
Volume463
DOIs
Publication statusPublished - 15 Oct 2014

Fingerprint

Hydroxyl Radical
Labeling
Polysaccharides
Disaccharides
Diagnostic products
Uronic Acids
Saccharification
Mammals
Rheumatic Fever
Dermatoglyphics
Biological systems
Fruits
Acetone
Rheumatic Diseases
Electrophoresis
Biomass
Amines
Digestion
Fruit
Animals

Keywords

  • Electrophoresis (high-voltage)
  • Fluorescent labelling
  • Hydroxyl radical
  • Non-enzymic scission
  • Pectin
  • Polysaccharide

ASJC Scopus subject areas

  • Biochemistry
  • Cell Biology
  • Molecular Biology

Cite this

Fingerprinting of hydroxyl radical-attacked polysaccharides by N-isopropyl-2-aminoacridone labelling. / Vreeburg, Robert A M; Othman, Babul Airianah; Fry, Stephen C.

In: Biochemical Journal, Vol. 463, 15.10.2014, p. 225-237.

Research output: Contribution to journalArticle

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