Development and characterization of Elaeis oleifera microsatellite markers

Noorhariza Mohd Zaki, Ismanizan Ismail, Rozana Rosli, Ting Ngoot Chin, Rajinder Singh

Research output: Contribution to journalArticle

8 Citations (Scopus)

Abstract

Ten Elaeis oleifera microsatellite markers were developed and characterised from 1500 sequences of the E. oleifera genomic library. The markers were utilised to assess the genetic diversity of E. oleifera germplasm collections from four South American countries (Colombia, Costa Rica, Panama and Honduras). The number of alleles per-locus varied from 2 to 11 and the observed and expected heterozygosity ranged from 0.0685 to 0.9853 and 0.1393 to 0.8216 respectively. Majority of the markers showed transferability to Elaeis guineensis while two markers showed transferability across Arecaceae taxa. These E. oleifera microsatellite markers are expected to become useful tools to determine the population structure and conservation of E. oleifera populations.

Original languageEnglish
Pages (from-to)909-912
Number of pages4
JournalSains Malaysiana
Volume39
Issue number6
Publication statusPublished - Dec 2010

Fingerprint

Elaeis oleifera
microsatellite repeats
Honduras
Arecaceae
genomic libraries
Elaeis guineensis
germplasm conservation
Panama
Costa Rica
Colombia
heterozygosity
population structure
alleles
genetic variation
loci

Keywords

  • E. Oleifera
  • Genomic
  • Microsatellite
  • Transferability

ASJC Scopus subject areas

  • General

Cite this

Zaki, N. M., Ismail, I., Rosli, R., Chin, T. N., & Singh, R. (2010). Development and characterization of Elaeis oleifera microsatellite markers. Sains Malaysiana, 39(6), 909-912.

Development and characterization of Elaeis oleifera microsatellite markers. / Zaki, Noorhariza Mohd; Ismail, Ismanizan; Rosli, Rozana; Chin, Ting Ngoot; Singh, Rajinder.

In: Sains Malaysiana, Vol. 39, No. 6, 12.2010, p. 909-912.

Research output: Contribution to journalArticle

Zaki, NM, Ismail, I, Rosli, R, Chin, TN & Singh, R 2010, 'Development and characterization of Elaeis oleifera microsatellite markers', Sains Malaysiana, vol. 39, no. 6, pp. 909-912.
Zaki, Noorhariza Mohd ; Ismail, Ismanizan ; Rosli, Rozana ; Chin, Ting Ngoot ; Singh, Rajinder. / Development and characterization of Elaeis oleifera microsatellite markers. In: Sains Malaysiana. 2010 ; Vol. 39, No. 6. pp. 909-912.
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